2020-Oct-12 14:27:23 L:\TDM\Validation_2020\HOL_trends_3\trendtest3.py: start L:\TDM\Validation_2020\HOL_trends_3\trendtest3.py version=20170210 absolute DATADIR: l:\TDM\Validation_2020\HOL_trends_3 Processing brd=HOL pop=SVK datadir=l:\TDM\Validation_2020\HOL_trends_3 stored 2246 records from file bdate_SVKHOL opening output file file313_SVKHOL ... -------------------------------------------------------------------------------- file305 trt miny maxy corr herds daus type2x bvta herit sdg inputs mil 2000 2010 0.99 10 20 Y BV 0.3090 383.81441 -------------------------------------------------------------------------------- reading file300_SVKHOL ... stored 2246 records for trait mil from file file300_SVKHOL reading file303_SVKHOL ... stored 1975 records for trait mil from file file303_SVKHOL Summary statistics for trait "mil" (N=242 bulls) -------------------------------------------------------------- Trait Variable Mean Std Min Max -------------------------------------------------------------- mil EBV CURRENT (y) 135.214 441.098 -1408.40 1360.00 mil EBV YYYY-4 (x) 166.310 459.212 -1386.00 1453.80 mil TIME VARIATE (t) 1.564 2.057 0.01 8.65 mil WEIGHTS (w) 45.083 17.851 3.21 98.43 mil BIRTH YEAR 2004.157 2.695 2000.00 2010.00 -------------------------------------------------------------- Regression of current EBV (y) on previous EBV (x) and TIME variate (t) ------------------------------------------------------------------------ _____ x _____ _____ t _____ Trait Slope s.e. Slope s.e. %R^2 RMSE ------------------------------------------------------------------------ mil 0.922 0.013 6.613 3.963 95.8 606.917 ------------------------------------------------------------------------ Regression 95% C.I. for delta [-1.154, 14.380] Bootstrap 95% C.I. for delta [-2.293, 16.017] ==> PASS for mil Biol. test: abs(6.613)/383.814 = 0.0172 (BV) ==> PASS for mil -------------------------------------------------------------------------------- file305 trt miny maxy corr herds daus type2x bvta herit sdg inputs fat 2000 2010 0.99 10 20 Y BV 0.2450 15.08265 -------------------------------------------------------------------------------- reading file300_SVKHOL ... stored 2246 records for trait fat from file file300_SVKHOL reading file303_SVKHOL ... stored 1975 records for trait fat from file file303_SVKHOL Summary statistics for trait "fat" (N=242 bulls) -------------------------------------------------------------- Trait Variable Mean Std Min Max -------------------------------------------------------------- fat EBV CURRENT (y) 4.630 15.336 -50.58 60.58 fat EBV YYYY-4 (x) 5.938 15.608 -50.71 62.67 fat TIME VARIATE (t) 1.564 2.057 0.01 8.65 fat WEIGHTS (w) 43.703 18.078 2.80 89.92 fat BIRTH YEAR 2004.157 2.695 2000.00 2010.00 -------------------------------------------------------------- Regression of current EBV (y) on previous EBV (x) and TIME variate (t) ------------------------------------------------------------------------ _____ x _____ _____ t _____ Trait Slope s.e. Slope s.e. %R^2 RMSE ------------------------------------------------------------------------ fat 0.943 0.015 -0.286 0.165 94.2 23.874 ------------------------------------------------------------------------ Regression 95% C.I. for delta [-0.610, 0.038] Bootstrap 95% C.I. for delta [-0.664, 0.151] ==> PASS for fat Biol. test: abs(-0.286)/15.083 = 0.0189 (BV) ==> PASS for fat -------------------------------------------------------------------------------- file305 trt miny maxy corr herds daus type2x bvta herit sdg inputs pro 2000 2010 0.99 10 20 Y BV 0.3010 10.70492 -------------------------------------------------------------------------------- reading file300_SVKHOL ... stored 2246 records for trait pro from file file300_SVKHOL reading file303_SVKHOL ... stored 1975 records for trait pro from file file303_SVKHOL Summary statistics for trait "pro" (N=242 bulls) -------------------------------------------------------------- Trait Variable Mean Std Min Max -------------------------------------------------------------- pro EBV CURRENT (y) 4.857 11.984 -34.92 39.29 pro EBV YYYY-4 (x) 6.228 12.333 -33.82 41.65 pro TIME VARIATE (t) 1.564 2.057 0.01 8.65 pro WEIGHTS (w) 44.917 17.869 3.16 97.49 pro BIRTH YEAR 2004.157 2.695 2000.00 2010.00 -------------------------------------------------------------- Regression of current EBV (y) on previous EBV (x) and TIME variate (t) ------------------------------------------------------------------------ _____ x _____ _____ t _____ Trait Slope s.e. Slope s.e. %R^2 RMSE ------------------------------------------------------------------------ pro 0.906 0.016 0.179 0.132 93.6 19.807 ------------------------------------------------------------------------ Regression 95% C.I. for delta [-0.080, 0.439] Bootstrap 95% C.I. for delta [-0.124, 0.486] ==> PASS for pro Biol. test: abs(0.179)/10.705 = 0.0167 (BV) ==> PASS for pro 2020-Oct-12 14:27:24 L:\TDM\Validation_2020\HOL_trends_3\trendtest3.py: end