2019-Sep-27 07:55:38 L:\TDM\Validation_2019\HOL\trendtest3.py: start L:\TDM\Validation_2019\HOL\trendtest3.py version=20170210 absolute DATADIR: l:\TDM\Validation_2019\HOL Processing brd=HOL pop=SVK datadir=l:\TDM\Validation_2019\HOL stored 1995 records from file bdate_SVKHOL opening output file file313_SVKHOL ... -------------------------------------------------------------------------------- file305 trt miny maxy corr herds daus type2x bvta herit sdg inputs scs 2000 2009 0.98 10 20 Y BV 0.2120 0.41691 -------------------------------------------------------------------------------- reading file300_SVKHOL ... stored 2171 records for trait scs from file file300_SVKHOL reading file303_SVKHOL ... stored 1881 records for trait scs from file file303_SVKHOL Summary statistics for trait "scs" (N=209 bulls) -------------------------------------------------------------- Trait Variable Mean Std Min Max -------------------------------------------------------------- scs EBV CURRENT (y) 2.988 0.377 2.07 4.09 scs EBV YYYY-4 (x) 2.916 0.378 1.92 4.05 scs TIME VARIATE (t) 1.234 1.760 0.02 7.78 scs WEIGHTS (w) 27.223 7.019 6.49 60.63 scs BIRTH YEAR 2003.488 2.442 2000.00 2009.00 -------------------------------------------------------------- Regression of current EBV (y) on previous EBV (x) and TIME variate (t) ------------------------------------------------------------------------ _____ x _____ _____ t _____ Trait Slope s.e. Slope s.e. %R^2 RMSE ------------------------------------------------------------------------ scs 0.965 0.018 -0.006 0.004 93.9 0.491 ------------------------------------------------------------------------ Regression 95% C.I. for delta [-0.014, 0.001] Bootstrap 95% C.I. for delta [-0.019, 0.006] ==> PASS for scs Biol. test: abs(-0.006)/0.417 = 0.0155 (BV) ==> PASS for scs -------------------------------------------------------------------------------- file305 trt miny maxy corr herds daus type2x bvta herit sdg inputs mas 2000 2009 0.98 10 20 Y BV 0.2120 0.41255 -------------------------------------------------------------------------------- reading file300_SVKHOL ... stored 2171 records for trait mas from file file300_SVKHOL reading file303_SVKHOL ... stored 1881 records for trait mas from file file303_SVKHOL Summary statistics for trait "mas" (N=209 bulls) -------------------------------------------------------------- Trait Variable Mean Std Min Max -------------------------------------------------------------- mas EBV CURRENT (y) 2.988 0.377 2.07 4.09 mas EBV YYYY-4 (x) 2.916 0.378 1.92 4.05 mas TIME VARIATE (t) 1.234 1.760 0.02 7.78 mas WEIGHTS (w) 27.223 7.019 6.49 60.63 mas BIRTH YEAR 2003.488 2.442 2000.00 2009.00 -------------------------------------------------------------- Regression of current EBV (y) on previous EBV (x) and TIME variate (t) ------------------------------------------------------------------------ _____ x _____ _____ t _____ Trait Slope s.e. Slope s.e. %R^2 RMSE ------------------------------------------------------------------------ mas 0.965 0.018 -0.006 0.004 93.9 0.491 ------------------------------------------------------------------------ Regression 95% C.I. for delta [-0.014, 0.001] Bootstrap 95% C.I. for delta [-0.020, 0.007] ==> PASS for mas Biol. test: abs(-0.006)/0.413 = 0.0157 (BV) ==> PASS for mas -------------------------------------------------------------------------------- file305 trt miny maxy corr herds daus type2x bvta herit sdg inputs dce 2000 2012 0.99 10 20 Y BV 0.0724 12.65749 -------------------------------------------------------------------------------- reading file300_SVKHOL ... stored 1527 records for trait dce from file file300_SVKHOL reading file303_SVKHOL ... stored 1255 records for trait dce from file file303_SVKHOL Summary statistics for trait "dce" (N=169 bulls) -------------------------------------------------------------- Trait Variable Mean Std Min Max -------------------------------------------------------------- dce EBV CURRENT (y) 100.571 11.667 39.94 130.36 dce EBV YYYY-4 (x) 100.742 11.134 46.00 127.34 dce TIME VARIATE (t) 0.725 1.022 0.00 5.19 dce WEIGHTS (w) 42.018 17.321 1.69 74.58 dce BIRTH YEAR 2005.769 3.216 2000.00 2012.00 -------------------------------------------------------------- Regression of current EBV (y) on previous EBV (x) and TIME variate (t) ------------------------------------------------------------------------ _____ x _____ _____ t _____ Trait Slope s.e. Slope s.e. %R^2 RMSE ------------------------------------------------------------------------ dce 0.983 0.021 -0.230 0.336 92.9 19.503 ------------------------------------------------------------------------ Regression 95% C.I. for delta [-0.889, 0.430] Bootstrap 95% C.I. for delta [-0.858, 0.466] ==> PASS for dce Biol. test: abs(-0.230)/12.657 = 0.0181 (BV) ==> PASS for dce -------------------------------------------------------------------------------- file305 trt miny maxy corr herds daus type2x bvta herit sdg inputs mce 2000 2012 0.99 10 20 Y BV 0.0671 16.0878 -------------------------------------------------------------------------------- reading file300_SVKHOL ... stored 1718 records for trait mce from file file300_SVKHOL reading file303_SVKHOL ... stored 1384 records for trait mce from file file303_SVKHOL Summary statistics for trait "mce" (N=202 bulls) -------------------------------------------------------------- Trait Variable Mean Std Min Max -------------------------------------------------------------- mce EBV CURRENT (y) 97.956 12.569 68.05 127.32 mce EBV YYYY-4 (x) 98.830 12.565 61.67 136.12 mce TIME VARIATE (t) 1.651 1.993 0.02 7.74 mce WEIGHTS (w) 36.845 20.932 1.52 71.96 mce BIRTH YEAR 2003.822 2.585 2000.00 2010.00 -------------------------------------------------------------- Regression of current EBV (y) on previous EBV (x) and TIME variate (t) ------------------------------------------------------------------------ _____ x _____ _____ t _____ Trait Slope s.e. Slope s.e. %R^2 RMSE ------------------------------------------------------------------------ mce 0.951 0.030 0.219 0.340 83.6 32.069 ------------------------------------------------------------------------ Regression 95% C.I. for delta [-0.448, 0.885] Bootstrap 95% C.I. for delta [-0.533, 1.025] ==> PASS for mce Biol. test: abs(0.219)/16.088 = 0.0136 (BV) ==> PASS for mce 2019-Sep-27 07:55:39 L:\TDM\Validation_2019\HOL\trendtest3.py: end